Package: hotfun 0.3.0
hotfun: Collection of Functions Used in the Health Outcomes Team at MSKCC
A mixed-bag of utility functions to ease analyses and reporting results.
Authors:
hotfun_0.3.0.tar.gz
hotfun_0.3.0.zip(r-4.5)hotfun_0.3.0.zip(r-4.4)hotfun_0.3.0.zip(r-4.3)
hotfun_0.3.0.tgz(r-4.4-any)hotfun_0.3.0.tgz(r-4.3-any)
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hotfun.pdf |hotfun.html✨
hotfun/json (API)
NEWS
| # Install 'hotfun' in R: |
| install.packages('hotfun', repos = c('https://ddsjoberg.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/ddsjoberg/hotfun/issues
- project_template - H.O.T. project template
- trial - Results from a simulated study of two chemotherapy agents: Drug A and Drug B
Last updated 3 years agofrom:f30f4d7293 (on v0.3.0). Checks:OK: 1 ERROR: 6. Indexed: yes.
| Target | Result | Date |
|---|---|---|
| Doc / Vignettes | OK | Nov 05 2024 |
| R-4.5-win | ERROR | Nov 05 2024 |
| R-4.5-linux | ERROR | Nov 05 2024 |
| R-4.4-win | ERROR | Nov 05 2024 |
| R-4.4-mac | ERROR | Nov 05 2024 |
| R-4.3-win | ERROR | Nov 05 2024 |
| R-4.3-mac | ERROR | Nov 05 2024 |
Exports:%>%add_splinesall_ofany_ofas_tibbleassign_timepointauc_densityauc_histogramclean_mrncontainscount_mapcount_nacreate_hot_projectegfr_mdrdends_witheverythingget_modeknit_printlast_collist_labelsmatchesnum_rangeone_ofrm_logsset_derived_variablesstarts_withtbl_propdiffuse_hot_fileuse_hot_gitignoreuse_hot_readmeuse_hot_rstudio_prefsvars
Dependencies:askpassbackportsbase64encbigDbitbit64bitopsbroombslibcachemcardscellrangercheckmateclicliprclustercolorspacecommonmarkcpp11crayoncredentialscurldata.tabledigestdplyrevaluatefansifarverfastmapfontawesomeforcatsforeignFormulafsgenericsgertggplot2gluegridExtragtgtablegtsummaryhavenherehighrHmischmshtmlTablehtmltoolshtmlwidgetshttrisobandjquerylibjsonlitejuicyjuiceknitrlabelinglabelledlatticelifecyclelubridatemagrittrmarkdownMASSMatrixmemoisemgcvmimemunsellnlmennetopensslpillarpkgconfigprettyunitsprogresspurrrR.methodsS3R.ooR.utilsR6rappdirsRColorBrewerRcppreactablereactRreadrreadxlrematchrenvrlangrmarkdownrpartrprojrootrstudio.prefsrstudioapirvestsassscalesselectrstarterstringistringrsystibbletidyrtidyselecttimechangetinytextzdbutf8V8vctrsviridisviridisLitevroomwithrxfunxml2yamlzip
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Add spline terms to a data frame | add_splines |
| Assign a timepoint to a long dataset with multiple measures | assign_timepoint |
| Calculate exact AUCs based on the distribution of risk in a population | auc_density |
| Calculate an AUC from a histogram | auc_histogram |
| Check and Format MRNs | clean_mrn |
| Checks variable creation for new derived variables at once | count_map |
| Assess pattern of missing data | count_na |
| Start a new H.O.T. project | create_hot_project |
| Calculate eGFR | egfr_mdrd |
| Calculates the mode(s) of a set of values | get_mode |
| Get variable labels and store in named list | list_labels |
| H.O.T. project template | project_template |
| Deletes log files created by Rscript on the Linux cluster | rm_logs |
| Apply variable labels to data frame | set_derived_variables |
| Calculating unadjusted and adjusted differences in rates | tbl_propdiff |
| Results from a simulated study of two chemotherapy agents: Drug A and Drug B | trial |
| Write a template file | use_hot_file use_hot_gitignore use_hot_readme |
| Use H.O.T. RStudio Preferences | use_hot_rstudio_prefs |
